Advanced Journal of Microbiology Research

Abstract: The cloning of a polymerase chain reaction (PCR) gene fragment from Bacillus sp. NR5 UPM isolated from the soil in Malaysia into an Escherichia coli expression vector was successfully carried out. Analysis of the nucleotide sequences revealed the presence of an open reading frame of 2112 bp which encoded a protein containing 704 amino acids with a putative molecular weight of 78.6 kDa. The deduced amino acids sequence showed about 98% homology with the CGTase from Bacillus sp. KC201. Compared to the wild type, the…

Abstract: World demand to find microorganism producers of enzymes with a potential biotechnological use is increasing daily. Therefore, the objective of this study was to find one or more microorganisms capable of oxidizing sugars. Of the thirteen strains tested AFG2 Colletotrichum lindemuthianum was the one who showed the best results concerning oxidant capacity against a variety of disaccharides. This fungus was selected for the time course of production of an extracellular oxide-reducing enzyme in liquid minimal medium. A…

Abstract: Inula viscosa, Inula graveolens and Inula crithmoïdes (Asteraceae) leaf and flower organic extracts (hexane, chloroform and methanol) were assessed for their antifungal activity against two Trichoderma species (Trichoderma harzianum and Trichoderma viride) and three formae speciales of Fusarium oxysporum. I. viscosa organic extracts showed an important inhibitory activity against all target fungal isolates. Growth inhibition percentage ranged between 17-61, 77-100, and 55-100% in presence of hexane, chloroform and…

Abstract: In order to develop the more EST-SSRs, 320 ESTs of ramie from NCBI were analyzed. 76 SSR primer-pairs developed from 320 ESTs were tested among 62 ramie individuals, and 27 SSR loci were polymorphic. Among the 27 primers, the numbers of alleles per locus ranged from two to five, in which 19 primers amplify two alleles, seven primers amplify three alleles, and only one primer amplifies five alleles. Observed heterozygosity (HO) of overall loci among the 27 primer pairs ranged from 0.16 to 0.93 and expected heterozyg…

Abstract: Biosurfactants are biodegradable, non-toxic and ecofriendly compounds released by microorganisms. Most of the microorganisms were isolated from contaminated sites by petroleum hydrocarbon and industrial wastes. In this study, a biosurfactant-producing strain was isolated from Daqing oil-contaminated sites in China by enrichment culture, hemolytic activity assay, hydrolyzing oil activity assay, improved degreasing effect assay, and emulsification activity measurement. The strain was identified as Pseudomonas sp. BS1…

Abstract: The aim of this present work is to produce Paecilomyces marquandii crude extract and its in vitro larvicidal action. Saccharose, glucose, coffee residue, soluble starch, insoluble starch, soybean meal and wheat bran were the carbon sources tested. NaNO3, NH4Cl, soybean meal, (NH4)2SO4, yeast extract, casein peptone, tryptone and NH4NO3 were the nitrogen sources tested. Central composite design was applied to determine the optimal concentration of the tested significant variables. The best carbon sources were glucos…

Abstract: A real-time polymerase chain reaction (PCR) assay utilizing high resolution melt (HRM) curve analysis was developed and tested for the monitoring of Vibrio cholerae in water samples. The assay utilized previously published primers that are specific to regions of the V. cholerae ompW and ctxAB genes, allowing it to differentiate between toxigenic and non-toxigenic strains. The ompW and ctxAB primers amplify target regions of 588 and 564 bp in length (respectively) and the amplicons could be accurately identified usi…

Abstract: Establishment of biofilm, production of exopolysacharides (EPS) and accumulation of endogenous osmolytes under varying stress conditions are significant strategies adopted by bacterial strains for their successful survival in plant rhizosphere. Our studies focus on determining the osmoadaptation strategies used by two native salt-tolerant strains Oceanobacillus profundus (Pmt2) and Staphylococcus saprophyticus (ST1) and their plant growth promoting abilities. The ability of these strains to be used as inoculants fo…

Abstract: The yeast Malassezia pachydermatis is part of the normal cutaneous microflora of most homoeothermic vertebrates. However, under certain conditions as high humidity, seborrheic skin, corticotherapy and immunodeficiency, it can become pathogenic and cause dermatopathies. The pathogenic role of the genus Malassezia seems to be related to physical, chemical and immunological disturbances and to the production of enzymes, including lipases, phospholipases and hydrolases. The Api-Zym® system is a semi quantitative method…

Abstract: Drymoglossum piloselloides (DP) is a small epiphytic fern commonly seen on trunks of older trees. The antimicrobial activity of water, ethanol and chloroform extracts of DP was tested against Trichophyton rubrum ATCC 40051 and Trichophyton mentagrophytes ATCC 40004 which are the two most commonly cause of Athlete’s foot, Candida albicans ATCC 14053, Candida tropicalis ATCC 14056, Microsporum canis (clinical isolate) and Aspergillus fumigatus ATCC 14109. The chloroform and ethanol extracts only had mild activity aga…

Abstract: A cross-sectional seroprevalence study of cattle foot and mouth disease (FMD) was conducted in Somalia Regional State (Awbere and Babille Districts) Western, Ethiopia. 384 blood samples were collected in the period of October 2009 to March 2010 from 384 animals and tested for antibodies against non-structural protein of FMD virus by using the 3ABC-ELISA. The overall individual animal antibody seroprevalence was 14.05% (95% CI = 11.2 to 18.13%). Statistically no significant variation (P > 0.05) was observed in the p…

Abstract: Eggplant (Solanum melongena) is an important vegetable and widely cultivated in polyethylene covered houses in Iraq. A new virus, Eggplant blister mottled virus (EBMV), was isolated in previous study, from naturally infected eggplant and was characterized as potyvirus. The virus is considered now as the most important virus infecting eggplants and causing heavy damage to yields. This study was conducted to evaluate the effect of three products, Vit-org nutrient, 2-nitromethyl phenol, and Thuja extract on the multip…

Abstract: The aim of this study is to investigate multi-drug resistance in A. baumannii strains that was isolated from clinical samples of three highly large hospitals in Tehran-Iran. This descriptive-cross sectional study was performed in three large hospitals in Tehran on 70 samples of Acinetobacter which were isolated from patients during April to November 2010. After identifying the species level by using culture and biochemical methods, in order to determine sensitivity of 50 isolates of A. baumannii to 13 antibiotics…

Abstract: We have explored a simplified system without purification for systematic evolution of ligands by exponential enrichment (SELEX) against Vibrio alginolyticus to select single-stranded DNA ligands (aptamers) from a random 82-nt library. The DNA content was quantified by agarose gel electrophoresis and follow-up image analyses with the BandScan 5.0 software. Anti-digoxigenin/HRP system was used to determine the binding activity of aptamers for V. alginolyticus. The results showed that the affinity of aptamers increase…

Abstract: Laboratory experiments were carried out in order to evaluate the insecticidal effect of diatomaceous earth against adults of Callosobruchus maculatus (F.) and Sitophilus granarius (L.), two important stored grain pests in darkness (30°C and 65% RH). Wheat and cowpea were treated with the diatomaceous earth formulation Silicosec® (Biofa, Germany), at five concentrations determined with preliminary tests and compared with untreated wheat and cowpea as control. Dead adults were counted 24, 36 and 48 h later. Results s…