By: Fu Xiao Shen, An Chun Cheng, *, Ming Shu Wang, Hai Bin Huang, Chuan Feng Li, Jin Feng Jiang, Ren Yong Jia, De Kang Zhu, and Xiao Yue Chen
Abstract: The aim was to identify the factors affecting synonymous codon usage bias in the newly discovered gC gene of duck plague virus (DPV) CHv strain and a comparative analysis of the codon usage bias in the gC genes of 27 other reference herpesviruses was performed by using CAI, CHIPS and CUSP program of EMBOSS. The results showed that base composition, mutational bias and natural selection were the major determinants of the codon usage variation in the DPV gC gene. The primary codon usage trends in the DPV gC gene show…
Keywords: Duck plague virus (DPV); gC gene; codon usage bias.
AJMR 2015, 14(1), 1-6;